SIO: Types and relations

Classes | Datatype Properties | Annotation Properties | Object Properties

Classes

sio:'material entity'

sio:'material entity' has attributes:

Label: 'material entity'
Definition: A material entity is a physical entity that is spatially extended, exists as a whole at any point in time and has mass.
sio:'material entity' is a prov:Entity and has the following children: sio:'chemical entity', sio:'heterogeneous substance'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'social entity'

sio:'information content entity'

sio:'information content entity' has attributes:

Label: 'information content entity'
Definition: Information content entity is an object that requires some background knowledge or procedure to correctly interpret.
sio:'information content entity' is a prov:Entity and has the following children: sio:'computational entity', sio:'language entity', sio:'mathematical entity', sio:'representation', sio:'social entity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'spatial quantity'

sio:'spatial quantity' has attributes:

Label: 'spatial quantity'
Definition: A spatial quantity is a quantity obtained from measuring the spatial extent of an entity
sio:'spatial quantity' is a sio:'dimensional quantity' and has the following children: sio:'1D extent quantity', sio:'2D extent quantity', sio:'3D extent quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'1D extent quantity'

sio:'1D extent quantity' has attributes:

Label: '1D extent quantity'
Definition: A quantity that extends in single dimension.
sio:'1D extent quantity' is a sio:'spatial quantity' and has the following children: sio:'depth', sio:'height', sio:'length', sio:'width'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'depth'

sio:'depth' has attributes:

Label: 'depth'
Definition: Depth is the dimensional extent into a plane of a 3D projection of the object.
sio:'depth' is a sio:'1D extent quantity' and has the following child: sio:'thickness'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'height'

sio:'height' has attributes:

Label: 'height'
Definition: Height is the one dimensional extent along the vertical projection of a 3D object from a base plane of reference.
sio:'height' is a sio:'1D extent quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'length'

sio:'length' has attributes:

Label: 'length'
Definition: Length is the longer dimensional extent along a 2D projection of the object.
sio:'length' is a sio:'1D extent quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'width'

sio:'width' has attributes:

Label: 'width'
Definition: Width is the shorter dimensional extent perpendicular to a 2D projection of the object.
sio:'width' is a sio:'1D extent quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'thickness'

sio:'thickness' has attributes:

Label: 'thickness'
Definition: Thickness is the shortest dimensional extent of a 3D projection of an object.
sio:'thickness' is a sio:'depth'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'2D extent quantity'

sio:'2D extent quantity' has attributes:

Label: '2D extent quantity'
Definition: A quantity that extends in two dimensions.
sio:'2D extent quantity' is a sio:'spatial quantity' and has the following children: sio:'area', sio:'length of perimeter'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'area'

sio:'area' has attributes:

Label: 'area'
Definition: Area is a quantity that pertains to the extent of a two-dimensional surface or shape, or planar lamina, in the plane.
sio:'area' is a sio:'2D extent quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'length of perimeter'

sio:'length of perimeter' has attributes:

Label: 'length of perimeter'
Definition: A perimeter is a length of the outline that surrounds a two-dimensional shape.
sio:'length of perimeter' is a sio:'2D extent quantity' and has the following child: sio:'circumference'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'circumference'

sio:'circumference' has attributes:

Label: 'circumference'
Definition: Circumference is the length of the outline of a circle or ellipse. it is defined as c = 2*pi*r, where r is the radius.
sio:'circumference' is a sio:'length of perimeter'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'3D extent quantity'

sio:'3D extent quantity' has attributes:

Label: '3D extent quantity'
Definition: A quantity that extends in three dimensions.
sio:'3D extent quantity' is a sio:'spatial quantity' and has the following children: sio:'density', sio:'volume'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'volume'

sio:'volume' has attributes:

Label: 'volume'
Definition: Volume is the quantity of three-dimensional space enclosed by some closed boundary.
sio:'volume' is a sio:'3D extent quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'quantity'

sio:'quantity' has attributes:

Label: 'quantity'
Definition: A quantity is an informational entity that gives the magnitude of a property.
sio:'quantity' is a sio:'measurement value' and has the following children: sio:'dimensional quantity', sio:'dimensionless quantity', sio:'unit of measurement'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'measurement value'

sio:'measurement value' has attributes:

Label: 'measurement value'
Definition: A measurement value is a quantitative description that reflects the magnitude of some attribute.
sio:'measurement value' is a sio:'number' and has the following child: sio:'quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'unit of measurement'

sio:'unit of measurement' has attributes:

Label: 'unit of measurement'
Definition: A unit of measurement is a definite magnitude of a physical quantity, defined and adopted by convention and/or by law, that is used as a standard for measurement of the same physical quantity.
sio:'unit of measurement' is a sio:'quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'mathematical entity'

sio:'mathematical entity' has attributes:

Label: 'mathematical entity'
Definition: A mathematical entity is an information content entity that are components of a mathematical system or can be defined in mathematical terms.
sio:'mathematical entity' is a sio:'information content entity' and has the following children: sio:'algorithm', sio:'number', sio:'variable'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'generic name'

sio:'generic name' has attributes:

Label: 'generic name'
Definition: A generic name is the preferred name provided by manufacturer.
sio:'generic name' is a sio:'name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'language entity'

sio:'language entity' has attributes:

Label: 'language entity'
Definition: A language entity implements some language specification for the visual interpretation and is part of some document.
sio:'language entity' is a sio:'information content entity' and has the following children: sio:'description', sio:'visual language entity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'visual language entity'

sio:'visual language entity' has attributes:

Label: 'visual language entity'
Definition: A visual language entity is a language entity that is expressed through physical expression of manual.
sio:'visual language entity' is a sio:'language entity' and has the following child: sio:'textual entity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'specification'

sio:'specification' has attributes:

Label: 'specification'
Definition: A specification is a description of the essential technical attributes/requirements for an object or procedure, and may be used to determine that the object / procedure meets its requirements/attributes.
sio:'specification' is a sio:'description' and has the following children: sio:'action specification', sio:'functional specification'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'action specification'

sio:'action specification' has attributes:

Label: 'action specification'
Definition: An action specification is a specification composed of a sequence of instructions to achieve some objective.
sio:'action specification' is a sio:'specification'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'algorithm'

sio:'algorithm' has attributes:

Label: 'algorithm'
Definition: An algorithm is an effective method expressed as a finite list of well-defined instructions for calculating a function.
sio:'algorithm' is a sio:'mathematical entity' and has the following child: sio:'workflow'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'software entity'

sio:'software entity' has attributes:

Label: 'software entity'
Definition: A software entity is a computational entity that can be interpreted by or directly executed by a processing unit.
sio:'software entity' is a sio:'computational entity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'identifier'

sio:'identifier' has attributes:

Label: 'identifier'
Definition: An identifier is a label that specifically refers to (identifies) an entity (instance/type).
sio:'identifier' is a sio:'label' and has the following children: sio:'informational entity identifier', sio:'physical entity identifier', sio:'positional identifier', sio:'unique identifier', sio:'version label'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'name'

sio:'name' has attributes:

Label: 'name'
Definition: A name is a label used to identify an entity.
sio:'name' is a sio:'label' and has the following children: sio:'brand name', sio:'common name', sio:'first name', sio:'generic name', sio:'last name', sio:'personal name', sio:'preferred name', sio:'scientific name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'preferred name'

sio:'preferred name' has attributes:

Label: 'preferred name'
Definition: A preferred name is the name that is generally used by some organization.
sio:'preferred name' is a sio:'name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'common name'

sio:'common name' has attributes:

Label: 'common name'
Definition: A common name is a name that is commonly used.
sio:'common name' is a sio:'name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'brand name'

sio:'brand name' has attributes:

Label: 'brand name'
Definition: A brand name is a trademarked and marketed name of a product.
sio:'brand name' is a sio:'name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'scientific name'

sio:'scientific name' has attributes:

Label: 'scientific name'
Definition: A scientific name is a name given through scientific nomenclature.
sio:'scientific name' is a sio:'name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'workflow'

sio:'workflow' has attributes:

Label: 'workflow'
Definition: A workflow is an algorithm that is is a depiction of a sequence of operations to achieve one or more objectives.
sio:'workflow' is a sio:'algorithm'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'description'

sio:'description' has attributes:

Label: 'description'
Definition: A description is language entity in which elements of a language (formal or natural) are used to characterize an entity.
sio:'description' is a sio:'language entity' and has the following children: sio:'history', sio:'proposition', sio:'specification'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'parameter'

sio:'parameter' has attributes:

Label: 'parameter'
Definition: A parameter is variable whose value changes the characteristics of a system or a function.
sio:'parameter' is a sio:'independent variable'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'document'

sio:'document' has attributes:

Label: 'document'
Definition: A document is a bounded physical or digital representation of a body of information designed with the capacity (and usually intent) to communicate.
sio:'document' is a sio:'textual entity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'label'

sio:'label' has attributes:

Label: 'label'
Definition: A label is a term that is associated with some entity
sio:'label' is a sio:'textual entity' and has the following children: sio:'identifier', sio:'name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'first name'

sio:'first name' has attributes:

Label: 'first name'
Definition: A first name is a name that denotes a specific individual between members of a group of individuals, whose members usually share the same surname.
sio:'first name' is a sio:'name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'last name'

sio:'last name' has attributes:

Label: 'last name'
Definition: A last name (surname) is a name added to a given name and is part of a personal name and is often the family name.
sio:'last name' is a sio:'name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'personal name'

sio:'personal name' has attributes:

Label: 'personal name'
Definition: A personal name is a name to identify an individual person and usually comprises of a first name and a last name.
sio:'personal name' is a sio:'name' and has the following child: sio:'legal name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'legal name'

sio:'legal name' has attributes:

Label: 'legal name'
Definition: A legal name is a name given at birth, or which appears on their birth certificate, marriage certificate, or change of name certificate.
sio:'legal name' is a sio:'personal name'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'document version'

sio:'document version' has attributes:

Label: 'document version'
Definition: A document version is a version of a work in some sequence of derivative works.
sio:'document version' is a sio:'version label'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'proposition'

sio:'proposition' has attributes:

Label: 'proposition'
Definition: A proposition is a sentence expressing something true or false.
sio:'proposition' is a sio:'description' and has the following child: sio:'belief'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'dimensionless quantity'

sio:'dimensionless quantity' has attributes:

Label: 'dimensionless quantity'
Definition: A dimensionless quantity is a quantity that has no associated unit.
sio:'dimensionless quantity' is a sio:'quantity' and has the following child: sio:'count'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'dimensional quantity'

sio:'dimensional quantity' has attributes:

Label: 'dimensional quantity'
Definition: A dimensional quantity is a quantity that has an associated unit.
sio:'dimensional quantity' is a sio:'quantity' and has the following children: sio:'dose', sio:'spatial quantity', sio:'time measurement'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'functional specification'

sio:'functional specification' has attributes:

Label: 'functional specification'
Definition: A functional specification is a specification that describes the characteristics of an object.
sio:'functional specification' is a sio:'specification' and has the following children: sio:'design specification', sio:'spatial specification'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'design specification'

sio:'design specification' has attributes:

Label: 'design specification'
Definition: A design specification is a specification that provides precise and explicit information about the requirements for a product design.
sio:'design specification' is a sio:'functional specification'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'spatial specification'

sio:'spatial specification' has attributes:

Label: 'spatial specification'
Definition: A specification for spatial location is an effective specification towards representation spatial position or spatial data.
sio:'spatial specification' is a sio:'functional specification' and has the following child: sio:'coordinate system'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'coordinate system'

sio:'coordinate system' has attributes:

Label: 'coordinate system'
Definition: A coordinate system is a specification for spatial location that uses a set of numbers, or coordinates, to uniquely determine the position of a point or other geometric element.
sio:'coordinate system' is a sio:'spatial specification' and has the following children: sio:'cartesian coordinate system', sio:'cylindrical coordinate system', sio:'polar coordinate system', sio:'spherical coordinate system'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'cartesian coordinate system'

sio:'cartesian coordinate system' has attributes:

Label: 'cartesian coordinate system'
Definition: A Cartesian coordinate system specifies each point uniquely in a plane by a pair of numerical coordinates, which are the signed distances from the point to two fixed perpendicular directed lines, measured in the same unit of length.
sio:'cartesian coordinate system' is a sio:'coordinate system'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'polar coordinate system'

sio:'polar coordinate system' has attributes:

Label: 'polar coordinate system'
Definition: A polar coordinate system is a two-dimensional coordinate system in which each point on a plane is determined by a distance from a fixed point and an angle from a fixed direction.
sio:'polar coordinate system' is a sio:'coordinate system'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'positional identifier'

sio:'positional identifier' has attributes:

Label: 'positional identifier'
Definition: A positional description is a description of location using some system or frame of reference.
sio:'positional identifier' is a sio:'identifier'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'cylindrical coordinate system'

sio:'cylindrical coordinate system' has attributes:

Label: 'cylindrical coordinate system'
Definition: A cylindrical coordinate system is a three-dimensional coordinate system that specifies point positions by the distance from a chosen reference axis, the direction from the axis relative to a chosen reference direction, and the distance from a chosen reference plane perpendicular to the axis.
sio:'cylindrical coordinate system' is a sio:'coordinate system'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'spherical coordinate system'

sio:'spherical coordinate system' has attributes:

Label: 'spherical coordinate system'
Definition: A spherical coordinate system is a coordinate system for three-dimensional space where the position of a point is specified by three numbers: the radial distance of that point from a fixed origin, its polar angle measured from a fixed zenith direction, and the azimuth angle of its orthogonal projection on a reference plane that passes through the origin and is orthogonal to the zenith, measured from a fixed reference direction on that plane.
sio:'spherical coordinate system' is a sio:'coordinate system'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'belief'

sio:'belief' has attributes:

Label: 'belief'
Definition: A belief is a proposition that is believed to be true.
sio:'belief' is a sio:'proposition' and has the following child: sio:'opinion'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'number'

sio:'number' has attributes:

Label: 'number'
Definition: A number is a mathematical object used to count, label, and measure.
sio:'number' is a sio:'mathematical entity' and has the following child: sio:'measurement value'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'variable'

sio:'variable' has attributes:

Label: 'variable'
Definition: A variable is a value that may change within the scope of a given problem or set of operations.
sio:'variable' is a sio:'mathematical entity' and has the following children: sio:'dependent variable', sio:'independent variable'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'time measurement'

sio:'time measurement' has attributes:

Label: 'time measurement'
Definition: Time measurement is a measurement value of the duration of some interval of time or a particular instant of time (against some frame of reference).
sio:'time measurement' is a sio:'dimensional quantity' and has the following children: sio:'time instant', sio:'time interval'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'file'

sio:'file' has attributes:

Label: 'file'
Definition: A file is an information-bearing object that contains a physical embodiment of some information using a particular character encoding.
sio:'file' is a sio:'computational entity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'time interval'

sio:'time interval' has attributes:

Label: 'time interval'
Definition: A time internval is a contiguous temporal region having some duration.
sio:'time interval' is a sio:'time measurement'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'time instant'

sio:'time instant' has attributes:

Label: 'time instant'
Definition: A time instant is a temporal region which occurs instantaneously, e.g. having no duration.
sio:'time instant' is a sio:'time measurement'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'human'

sio:'human' has attributes:

Label: 'human'
Definition: A human is a primates of the family Hominidae and are characterized by having a large brain relative to body size, with a well developed neocortex, prefrontal cortex and temporal lobes, making them capable of abstract reasoning, language, introspection, problem solving and culture through social learning.
sio:'human' is a sio:'multicellular organism'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'mouse'

sio:'mouse' has attributes:

Label: 'mouse'
Definition: A mouse is a small mammal belonging to the order of rodents, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail.
sio:'mouse' is a sio:'multicellular organism'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'rat'

sio:'rat' has attributes:

Label: 'rat'
Definition: A rat is a medium-sized, long-tailed rodent of the superfamily Muroidea.
sio:'rat' is a sio:'multicellular organism'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'model'

sio:'model' has attributes:

Label: 'model'
Definition: A model is a representation of some thing.
sio:'model' is a sio:'representation'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'data storage device'

sio:'data storage device' has attributes:

Label: 'data storage device'
Definition: A data storage device is a device that is capable of storing information.
sio:'data storage device' is a sio:'device'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'computational entity'

sio:'computational entity' has attributes:

Label: 'computational entity'
Definition: A computational entity is an information content entity operated on using some computational system.
sio:'computational entity' is a sio:'information content entity' and has the following children: sio:'file', sio:'software entity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'representation'

sio:'representation' has attributes:

Label: 'representation'
Definition: A representation is a entity that in some way represents another entity (or attribute thereof).
sio:'representation' is a sio:'information content entity' and has the following child: sio:'model'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'attribute'

sio:'attribute' has attributes:

Label: 'attribute'
Definition: An attribute is a characteristic of some entity.
sio:'attribute' is a prov:Entity.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'textual entity'

sio:'textual entity' has attributes:

Label: 'textual entity'
Definition: A textual entity is language entity that is manifested as one or more distinct characters.
sio:'textual entity' is a sio:'visual language entity' and has the following children: sio:'document', sio:'label'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'version label'

sio:'version label' has attributes:

Label: 'version label'
Definition: A version label is a label for a particular form or variation of an earlier or original type.
sio:'version label' is a sio:'identifier' and has the following children: sio:'document version', sio:'software version label'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'software version label'

sio:'software version label' has attributes:

Label: 'software version label'
Definition: A software version label is a version label for a piece of software.
sio:'software version label' is a sio:'version label' and has the following children: sio:'minor version number', sio:'revision number'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'unique identifier'

sio:'unique identifier' has attributes:

Label: 'unique identifier'
Definition: A unique identifier is an identifier that uniquely identifies some thing.
sio:'unique identifier' is a sio:'identifier'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'record identifier'

sio:'record identifier' has attributes:

Label: 'record identifier'
Definition: A record identifier is an identifier for a database entry.
sio:'record identifier' is a sio:'informational entity identifier'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'physical entity identifier'

sio:'physical entity identifier' has attributes:

Label: 'physical entity identifier'
Definition: A physical entity identifier is an identifier for a physical entity.
sio:'physical entity identifier' is a sio:'identifier'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'informational entity identifier'

sio:'informational entity identifier' has attributes:

Label: 'informational entity identifier'
Definition: An informational entity identifier is an identifier for an informational entity.
sio:'informational entity identifier' is a sio:'identifier' and has the following children: sio:'URL', sio:'record identifier'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'count'

sio:'count' has attributes:

Label: 'count'
Definition: The number of elements of a finite set of objects.
sio:'count' is a sio:'dimensionless quantity' and has the following child: sio:'age'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'URL'

sio:'URL' has attributes:

Label: 'URL'
Definition: A Uniform Resource Locator or Universal Resource Locator (URL) is a specific character string that constitutes a reference to an Internet resource.
sio:'URL' is a sio:'informational entity identifier'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'independent variable'

sio:'independent variable' has attributes:

Label: 'independent variable'
Definition: An independent variable is a variable that may take on different values independent of other elements in a system.
sio:'independent variable' is a sio:'variable' and has the following child: sio:'parameter'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'dependent variable'

sio:'dependent variable' has attributes:

Label: 'dependent variable'
Definition: A dependent variable is one whose value changes as a consequence of changes in other values in the system.
sio:'dependent variable' is a sio:'variable'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'device'

sio:'device' has attributes:

Label: 'device'
Definition: A device is usually a constructed tool.
sio:'device' is a sio:'heterogeneous substance' and has the following child: sio:'data storage device'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'clinical trial'

sio:'clinical trial' has attributes:

Label: 'clinical trial'
Definition: A clinical trial is an intervention trial to determine the safety and efficacy of medical interventions (e.g., drugs, diagnostics, devices, therapy protocols).
sio:'clinical trial' is a nidm:Project.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'diagnostic opinion'

sio:'diagnostic opinion' has attributes:

Label: 'diagnostic opinion'
Definition: A diagnostic opinion is an opinion resulting from a medical diagnostic procedure.
sio:'diagnostic opinion' is a sio:'opinion'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'opinion'

sio:'opinion' has attributes:

Label: 'opinion'
Definition: An opinion is a belief that is the result of emotion or interpretation of facts.
sio:'opinion' is a sio:'belief' and has the following child: sio:'diagnostic opinion'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'age'

sio:'age' has attributes:

Label: 'age'
Definition: Age is the length of time that a person has lived or a thing has existed.
sio:'age' is a sio:'count'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'ethnicity'

sio:'ethnicity' has attributes:

Label: 'ethnicity'
Definition: Ethnicity is the biological quality of membership in a social group based on a common heritage.
sio:'ethnicity' is a obo:PATO_0001995.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'race'

sio:'race' has attributes:

Label: 'race'
Definition: Race is a characteristic of an individual by heritable phenotypic characteristics, geographic ancestry, physical appearance, ethnicity, and social status.
sio:'race' is a obo:PATO_0001995.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'dose'

sio:'dose' has attributes:

Label: 'dose'
Definition: A dose is the quantity of a chemical substance administered to a biological system.
sio:'dose' is a sio:'dimensional quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'minor version number'

sio:'minor version number' has attributes:

Label: 'minor version number'
Definition: A minor version number is a version of a software that exhibits minor features or significant fix from a prior version.
sio:'minor version number' is a sio:'software version label'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'revision number'

sio:'revision number' has attributes:

Label: 'revision number'
Definition: A revision number is a version of a software in which bugs have been fixed from a prior version.
sio:'revision number' is a sio:'software version label'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'control group'

sio:'control group' has attributes:

Label: 'control group'
Definition: A control group is a group of individuals that are not subject to an intervention of interest, but rather serve as a baseline to compare the outcomes in the intervention group.
sio:'control group' is a nidm:Group.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'intervention group'

sio:'intervention group' has attributes:

Label: 'intervention group'
Definition: An intervention group is a group of individuals that are subject to an intervention.
sio:'intervention group' is a nidm:Group.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'history'

sio:'history' has attributes:

Label: 'history'
Definition: History is a sequence of past events.
sio:'history' is a sio:'description' and has the following child: sio:'family history'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'density'

sio:'density' has attributes:

Label: 'density'
Definition: Density (volumetric mass density) is the quantity of mass per unit volume of a substance.
sio:'density' is a sio:'3D extent quantity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'organism'

sio:'organism' has attributes:

Label: 'organism'
Definition: A biological organism is a biological entity that consists of one or more cells and is capable of genomic replication (independently or not).
sio:'organism' is a sio:'biological entity' and has the following child: sio:'cellular organism'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'chemical entity'

sio:'chemical entity' has attributes:

Label: 'chemical entity'
Definition: A chemical entity is a material entity that pertains to chemistry.
sio:'chemical entity' is a sio:'material entity'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'biological entity'

sio:'biological entity' has attributes:

Label: 'biological entity'
Definition: A biological entity is a heterogeneous substance that contains genomic material or is the product of a biological process.
sio:'biological entity' is a sio:'heterogeneous substance' and has the following child: sio:'organism'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'family history'

sio:'family history' has attributes:

Label: 'family history'
Definition: Family history is the systematic narrative and research of past events relating to a specific family, or specific families.
sio:'family history' is a sio:'history'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'multicellular organism'

sio:'multicellular organism' has attributes:

Label: 'multicellular organism'
Definition: A multi-cellular organism is an organism that consists of more than one cell.
sio:'multicellular organism' is a sio:'cellular organism' and has the following children: sio:'human', sio:'mouse', sio:'rat'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'cellular organism'

sio:'cellular organism' has attributes:

Label: 'cellular organism'
Definition: A cellular organism is an organism that contains one or more cells.
sio:'cellular organism' is a sio:'organism' and has the following child: sio:'multicellular organism'.
Type: owl:Class
Curation Status: obo:IAO_0000124

sio:'heterogeneous substance'

sio:'heterogeneous substance' has attributes:

Label: 'heterogeneous substance'
Definition: A heterogeneous substance is a chemical substance that is composed of more than one different kind of component.
sio:'heterogeneous substance' is a sio:'material entity' and has the following children: sio:'biological entity', sio:'device'.
Type: owl:Class
Curation Status: obo:IAO_0000124

Datatype Properties

sio:'has value'

sio:'has value' has attributes:

Label: 'has value'
Definition: A relation between a informational entity and its actual value (numeric, date, text, etc).
sio:'has value' is a owl:DatatypeProperty, owl:FunctionalProperty.
Type: owl:DatatypeProperty, owl:FunctionalProperty
Curation Status: obo:IAO_0000124

Annotation Properties

sio:equivalentTo

sio:equivalentTo has attributes:

Label: equivalentTo
Definition:
sio:equivalentTo is a owl:AnnotationProperty.
Type: owl:AnnotationProperty
Curation Status: obo:IAO_0000124

sio:example

sio:example has attributes:

Label: example
Definition:
sio:example is a owl:AnnotationProperty.
Type: owl:AnnotationProperty
Curation Status: obo:IAO_0000124

sio:hasSynonym

sio:hasSynonym has attributes:

Label: hasSynonym
Definition:
sio:hasSynonym is a owl:AnnotationProperty.
Type: owl:AnnotationProperty
Curation Status: obo:IAO_0000124

sio:subset

sio:subset has attributes:

Label: subset
Definition:
sio:subset is a owl:AnnotationProperty.
Type: owl:AnnotationProperty
Curation Status: obo:IAO_0000124

Object Properties

sio:'is related to'

sio:'has attribute'

sio:'has attribute' has attributes:

Label: 'has attribute'
Definition: Has attribute is a relation that associates a entity with an attribute where an attribute is an intrinsic characteristic such as a quality, capability, disposition, function, or is an externally derived attribute determined from some descriptor (e.g. a quantity, position, label/identifier) either directly or indirectly through generalization of entities of the same type.
sio:'has attribute' is a sio:'is related to'.
Type: owl:ObjectProperty
Curation Status: obo:IAO_0000124

sio:'has member'

sio:'has member' has attributes:

Label: 'has member'
Definition: Has member is a mereological relation between a collection and an item.
sio:'has member' is a sio:'has attribute'.
Type: owl:ObjectProperty, owl:IrreflexiveProperty
Curation Status: obo:IAO_0000124

sio:'represents'

sio:'represents' has attributes:

Label: 'represents'
Definition: A represents b when a serves as a sign, symbol or model of b.
sio:'represents' is a owl:ObjectProperty.
Type: owl:ObjectProperty
Curation Status: obo:IAO_0000124

sio:'has unit'

sio:'has unit' has attributes:

Label: 'has unit'
Definition: Has unit is a relation between a quantity and the unit it is a multiple of.
sio:'has unit' is a sio:'has attribute'.
Type: owl:FunctionalProperty, owl:ObjectProperty
Range: sio:SIO_000074
Curation Status: obo:IAO_0000124

sio:'is model of'

sio:'is model of' has attributes:

Label: 'is model of'
Definition: Is model of is a relation between a model (an artifact) and the entity it purports to represent.
sio:'is model of' is a sio:'represents'.
Type: owl:ObjectProperty
Curation Status: obo:IAO_0000124

sio:'is comparable to'

sio:'is comparable to' has attributes:

Label: 'is comparable to'
Definition: Is comparable to is a relation between two entities that share at least one feature whose value can be compared.
sio:'is comparable to' is a sio:'is related to'.
Type: owl:SymmetricProperty, owl:ObjectProperty
Curation Status: obo:IAO_0000124

sio:'is identical to'

sio:'is identical to' has attributes:

Label: 'is identical to'
Definition: Is identical to is a relation between two objects that are conceptually the same notwithstanding provenance or other non-intrinsic attributes.
sio:'is identical to' is a sio:'is comparable to'.
Type: owl:SymmetricProperty, owl:ObjectProperty
Curation Status: obo:IAO_0000124